| # Refer to all C/Fortran routines by their name prefixed by C_ | |
| useDynLib(stats, .registration = TRUE, .fixes = "C_") | |
| import(graphics) | |
| importFrom(grDevices, as.graphicsAnnot, dev.cur, dev.flush, dev.hold, | |
| dev.interactive, dev.new, dev.set, devAskNewPage, | |
| extendrange, n2mfrow, palette, xy.coords) | |
| importFrom(utils, count.fields, flush.console, str, tail) | |
| export(.checkMFClasses, .getXlevels, .MFclass, .nknots.smspl, | |
| acf, acf2AR, add.scope, | |
| add1, addmargins, aggregate,aggregate.ts, AIC, alias, anova, | |
| aov, approx, approxfun, ar, ar.burg, ar.mle, ar.ols, ar.yw, | |
| arima, arima.sim, arima0, arima0.diag, ARMAacf, ARMAtoMA, | |
| as.dendrogram, as.dist, as.formula, as.hclust, as.stepfun, | |
| as.ts, asOneSidedFormula, ave, bandwidth.kernel, BIC, binomial, | |
| biplot, Box.test, bw.bcv, bw.nrd, bw.nrd0, bw.SJ, bw.ucv, C, | |
| cancor, case.names, ccf, cmdscale, coef, coefficients, | |
| complete.cases, confint, confint.default, confint.lm, constrOptim, | |
| contr.SAS, contr.helmert, contr.poly, contr.sum, | |
| contr.treatment, contrasts, "contrasts<-", convolve, | |
| cooks.distance, cophenetic, cor, cov, cov.wt, cov2cor, | |
| covratio, cpgram, cutree, cycle, | |
| D, DF2formula, | |
| dbeta, dbinom, dcauchy, | |
| dchisq, decompose, delete.response, deltat, dendrapply, | |
| density, deriv, deriv3, deviance, dexp, df, df.kernel, | |
| df.residual, dfbeta, dfbetas, dffits, dgamma, dgeom, dhyper, | |
| diffinv, dist, dlnorm, dlogis, dmultinom, dnbinom, dnorm, | |
| dpois, drop.scope, drop.terms, drop1, dsignrank, dt, | |
| dummy.coef, dummy.coef.lm, dunif, dweibull, dwilcox, ecdf, eff.aovlist, | |
| effects, embed, estVar, end, expand.model.frame, extractAIC, | |
| factanal, factor.scope, family, fft, filter, fitted, | |
| fitted.values, fivenum, formula, frequency, ftable, Gamma, | |
| gaussian, get_all_vars, getCall, getInitial, glm, glm.control, | |
| glm.fit, hasTsp, hat, hatvalues, hclust, heatmap, HoltWinters, | |
| influence, influence.measures, integrate, interaction.plot, | |
| inverse.gaussian, IQR, is.empty.model, is.leaf, is.mts, | |
| is.stepfun, is.ts, is.tskernel, isoreg, KalmanForecast, | |
| KalmanLike, KalmanRun, KalmanSmooth, kernapply, kernel, kmeans, | |
| knots, ksmooth, lag, lag.plot, line, lm, lm.fit, .lm.fit, | |
| lm.influence, lm.wfit, loadings, loess, loess.control, | |
| loess.smooth, logLik, loglin, lowess, ls.diag, ls.print, lsfit, | |
| mad, mahalanobis, make.link, makeARIMA, makepredictcall, | |
| manova, mauchly.test, median, medpolish, model.extract, | |
| model.frame, model.matrix, model.offset, model.response, | |
| model.tables, model.weights, monthplot, mvfft, na.action, | |
| na.contiguous, na.exclude, na.fail, na.omit, na.pass, | |
| napredict, naprint, naresid, nextn, nlm, nlminb, nls, | |
| nls.control, NLSstAsymptotic, NLSstClosestX, NLSstLfAsymptote, | |
| NLSstRtAsymptote, nobs, numericDeriv, offset, optim, optimHess, | |
| optimise, optimize, order.dendrogram, p.adjust, | |
| p.adjust.methods, pacf, pairwise.table, pbeta, pbinom, pcauchy, | |
| pchisq, pexp, pf, pgamma, pgeom, phyper, plclust, plnorm, | |
| plogis, pnbinom, pnorm, poisson, poly, polym, power, ppoints, | |
| ppois, ppr, PP.test, prcomp, predict, preplot, .preformat.ts, princomp, | |
| printCoefmat, profile, proj, promax, psignrank, pt, ptukey, | |
| punif, pweibull, pwilcox, qbeta, qbinom, qcauchy, qchisq, qexp, | |
| qf, qgamma, qgeom, qhyper, qlnorm, qlogis, qnbinom, qnorm, | |
| qpois, qqline, qqnorm, qqplot, qsignrank, qt, qtukey, quantile, | |
| quasi, quasibinomial, quasipoisson, qunif, qweibull, qwilcox, | |
| r2dtable, rbeta, rbinom, rcauchy, rchisq, read.ftable, | |
| rect.hclust, reformulate, relevel, reorder, replications, | |
| reshape, resid, residuals, rexp, rf, rgamma, rgeom, rhyper, | |
| rlnorm, rlogis, rmultinom, rnbinom, rnorm, rpois, rsignrank, | |
| rstandard, rstudent, rt, runif, runmed, rweibull, rwilcox, | |
| rWishart, scatter.smooth, screeplot, sd, se.contrast, | |
| selfStart, setNames, sigma, simulate, smooth, smooth.spline, | |
| smoothEnds, sortedXyData, spec.ar, spec.pgram, spec.taper, | |
| spectrum, spline, splinefun, splinefunH, SSD, SSasymp, | |
| SSasympOff, SSasympOrig, SSbiexp, SSfol, SSfpl, SSgompertz, | |
| SSlogis, SSmicmen, SSweibull, start, stat.anova, step, stepfun, | |
| stl, StructTS, summary.manova, supsmu, symnum, termplot, terms, | |
| time, toeplitz, ts, ts.intersect, ts.plot, ts.union, tsdiag, | |
| tsp, "tsp<-", tsSmooth, TukeyHSD, uniroot, update, var, | |
| variable.names, varimax, .vcov.aliased, vcov, weighted.mean, | |
| weighted.residuals, weights, window, "window<-", write.ftable, | |
| xtabs, pbirthday, qbirthday) | |
| ## from ctest | |
| export(ansari.test, bartlett.test, binom.test, chisq.test, cor.test, | |
| fisher.test, fligner.test, friedman.test, kruskal.test, | |
| ks.test, mantelhaen.test, mauchly.test, mcnemar.test, | |
| mood.test, oneway.test, pairwise.prop.test, pairwise.t.test, | |
| pairwise.wilcox.test, poisson.test, power.anova.test, | |
| power.prop.test, power.t.test, prop.test, prop.trend.test, | |
| quade.test, shapiro.test, t.test, var.test, wilcox.test) | |
| export(plot.spec.coherency, plot.spec.phase) | |
| ## methods used by R itself. | |
| export(density.default, model.frame.default, plot.ecdf, plot.stepfun, | |
| summary.aov, summary.lm, summary.stepfun, update.formula) | |
| ## historical | |
| export(aggregate.data.frame, median.default, model.matrix.default, | |
| model.matrix.lm, plot.ts, predict.glm, predict.lm, | |
| residuals.glm, residuals.lm, summary.glm, terms.formula, | |
| update.default) | |
| ## model.matrix.lm: robustbase | |
| ## residuals.glm: DAMisc, car, haplo.stats, lasso2, plsRbeta, plsRglm, rms, spgwr | |
| ## residuals.lm: CADFest, robustbase | |
| ## update.default: MuMIn, spatstat | |
| ## register all the methods for generics elsewhere in case namespace is | |
| ## loaded but not currently attached. | |
| S3method("[", acf) | |
| S3method("[", formula) | |
| S3method("[", terms) | |
| S3method("[", ts) | |
| S3method("[", tskernel) | |
| S3method("[<-", ts) | |
| S3method("[[", dendrogram) | |
| S3method(add1, default) | |
| S3method(add1, glm) | |
| S3method(add1, lm) | |
| S3method(add1, mlm) | |
| S3method(aggregate, data.frame) | |
| S3method(aggregate, default) | |
| S3method(aggregate, "formula") | |
| S3method(aggregate, ts) | |
| S3method(AIC, default) | |
| S3method(AIC, logLik) | |
| S3method(alias, formula) | |
| S3method(alias, lm) | |
| S3method(ansari.test, default) | |
| S3method(ansari.test, formula) | |
| S3method(ar.burg, default) | |
| S3method(ar.burg, mts) | |
| S3method(ar.yw, default) | |
| S3method(ar.yw, mts) | |
| S3method(as.data.frame, aovproj) | |
| S3method(as.data.frame, ftable) | |
| S3method(as.data.frame, logLik) | |
| S3method(as.dendrogram, dendrogram) | |
| S3method(as.dendrogram, hclust) | |
| S3method(as.dist, default) | |
| S3method(as.hclust, dendrogram) | |
| S3method(as.hclust, default) | |
| S3method(as.hclust, twins) | |
| S3method(as.matrix, dist) | |
| S3method(as.matrix, ftable) | |
| S3method(as.stepfun, default) | |
| S3method(as.stepfun, isoreg) | |
| S3method(as.table, ftable) | |
| S3method(as.ts, default) | |
| S3method(anova, glm) | |
| S3method(anova, glmlist) | |
| S3method(anova, lm) | |
| S3method(anova, lmlist) | |
| S3method(anova, loess) | |
| S3method(anova, mlm) | |
| S3method(anova, nls) | |
| S3method(bartlett.test, default) | |
| S3method(bartlett.test, formula) | |
| S3method(BIC, default) | |
| S3method(BIC, logLik) | |
| S3method(biplot, default) | |
| S3method(biplot, princomp) | |
| S3method(biplot, prcomp) | |
| S3method(case.names, default) | |
| S3method(case.names, lm) | |
| S3method(cbind, ts) | |
| S3method(coef, aov) | |
| S3method(coef, Arima) | |
| S3method(coef, default) | |
| S3method(coef, listof) | |
| S3method(coef, maov) | |
| S3method(coef, nls) | |
| S3method(confint, default) | |
| S3method(confint, glm) | |
| S3method(confint, lm) | |
| S3method(confint, nls) | |
| S3method(cooks.distance, glm) | |
| S3method(cooks.distance, lm) | |
| S3method(cophenetic, default) | |
| S3method(cophenetic, dendrogram) | |
| S3method(cor.test, default) | |
| S3method(cor.test, formula) | |
| S3method(cut, dendrogram) | |
| S3method(cycle, default) | |
| S3method(cycle, ts) | |
| S3method(deltat, default) | |
| S3method(density, default) | |
| S3method(deriv, default) | |
| S3method(deriv, formula) | |
| S3method(deriv3, default) | |
| S3method(deriv3, formula) | |
| S3method(deviance, default) | |
| S3method(deviance, glm) | |
| S3method(deviance, lm) | |
| S3method(deviance, mlm) | |
| S3method(deviance, nls) | |
| S3method(diffinv, default) | |
| S3method(diffinv, ts) | |
| S3method(diffinv, vector) | |
| S3method(df.residual, default) | |
| S3method(df.residual, nls) | |
| S3method(dfbeta, lm) | |
| S3method(dfbetas, lm) | |
| S3method(diff, ts) | |
| S3method(drop1, default) | |
| S3method(drop1, glm) | |
| S3method(drop1, lm) | |
| S3method(drop1, mlm) | |
| S3method(dummy.coef, aovlist) | |
| S3method(dummy.coef, lm) | |
| S3method(effects, glm) | |
| S3method(effects, lm) | |
| S3method(end, default) | |
| S3method(estVar, SSD) | |
| S3method(estVar, mlm) | |
| S3method(extractAIC, aov) | |
| S3method(extractAIC, coxph) | |
| S3method(extractAIC, glm) | |
| S3method(extractAIC, lm) | |
| S3method(extractAIC, negbin) | |
| S3method(extractAIC, survreg) | |
| S3method(family, glm) | |
| S3method(family, lm) | |
| S3method(fitted, default) | |
| S3method(fitted, isoreg) | |
| S3method(fitted, kmeans) | |
| S3method(fitted, nls) | |
| S3method(fitted, smooth.spline) | |
| S3method(fligner.test, default) | |
| S3method(fligner.test, formula) | |
| S3method(format, dist) | |
| S3method(format, ftable) | |
| S3method(formula, character) | |
| S3method(formula, data.frame) | |
| S3method(formula, default) | |
| S3method(formula, formula) | |
| S3method(formula, glm) | |
| S3method(formula, lm) | |
| S3method(formula, nls) | |
| S3method(formula, terms) | |
| S3method(frequency, default) | |
| S3method(friedman.test, default) | |
| S3method(friedman.test, formula) | |
| S3method(ftable, default) | |
| S3method(ftable, formula) | |
| S3method(getCall, default) | |
| S3method(getInitial, default) | |
| S3method(getInitial, formula) | |
| S3method(getInitial, selfStart) | |
| S3method(hatvalues, lm) | |
| S3method(hatvalues, smooth.spline) | |
| S3method(identify, hclust) | |
| S3method(influence, glm) | |
| S3method(influence, lm) | |
| S3method(kernapply, default) | |
| S3method(kernapply, ts) | |
| S3method(kernapply, tskernel) | |
| S3method(kernapply, vector) | |
| S3method(knots, stepfun) | |
| S3method(kruskal.test, default) | |
| S3method(kruskal.test, formula) | |
| S3method(labels, dendrogram) | |
| S3method(labels, dist) | |
| S3method(labels, lm) | |
| S3method(labels, terms) | |
| S3method(lag, default) | |
| S3method(lines, isoreg) | |
| S3method(lines, stepfun) | |
| S3method(lines, ts) | |
| S3method(logLik, Arima) | |
| S3method(logLik, glm) | |
| S3method(logLik, lm) | |
| S3method(logLik, logLik) | |
| S3method(logLik, nls) | |
| S3method(makepredictcall, default) | |
| S3method(makepredictcall, poly) | |
| S3method(mauchly.test, SSD) | |
| S3method(mauchly.test, mlm) | |
| S3method(median, default) | |
| S3method(merge, dendrogram) | |
| S3method(model.frame, aovlist) | |
| S3method(model.frame, default) | |
| S3method(model.frame, glm) | |
| S3method(model.frame, lm) | |
| S3method(model.matrix, default) | |
| S3method(model.matrix, lm) | |
| S3method(model.tables, aov) | |
| S3method(model.tables, aovlist) | |
| S3method(monthplot, default) | |
| S3method(monthplot, stl) | |
| S3method(monthplot, StructTS) | |
| S3method(monthplot, ts) | |
| S3method(mood.test, default) | |
| S3method(mood.test, formula) | |
| S3method(na.action, default) | |
| S3method(na.contiguous, default) | |
| S3method(na.exclude, data.frame) | |
| S3method(na.exclude, default) | |
| S3method(na.fail, default) | |
| S3method(na.omit, data.frame) | |
| S3method(na.omit, default) | |
| S3method(na.omit, ts) | |
| S3method(napredict, default) | |
| S3method(napredict, exclude) | |
| S3method(naprint, default) | |
| S3method(naprint, exclude) | |
| S3method(naprint, omit) | |
| S3method(naresid, default) | |
| S3method(naresid, exclude) | |
| S3method(NLSstAsymptotic, sortedXyData) | |
| S3method(NLSstClosestX, sortedXyData) | |
| S3method(NLSstLfAsymptote, sortedXyData) | |
| S3method(NLSstRtAsymptote, sortedXyData) | |
| S3method(nobs, default) | |
| S3method(nobs, dendrogram) | |
| S3method(nobs, glm) | |
| S3method(nobs, lm) | |
| S3method(nobs, logLik) | |
| S3method(nobs, nls) | |
| S3method(Ops, ts) | |
| S3method(pacf, default) | |
| S3method(plot, acf) | |
| S3method(plot, decomposed.ts) | |
| S3method(plot, dendrogram) | |
| S3method(plot, density) | |
| S3method(plot, ecdf) | |
| S3method(plot, hclust) | |
| S3method(plot, HoltWinters) | |
| S3method(plot, isoreg) | |
| S3method(plot, lm) | |
| S3method(plot, medpolish) | |
| S3method(plot, mlm) | |
| S3method(plot, ppr) | |
| S3method(plot, prcomp) | |
| S3method(plot, princomp) | |
| S3method(plot, profile.nls) | |
| S3method(plot, spec) | |
| S3method(plot, stepfun) | |
| S3method(plot, stl) | |
| S3method(plot, ts) | |
| S3method(plot, tskernel) | |
| S3method(plot, TukeyHSD) | |
| S3method(ppr, default) | |
| S3method(ppr, formula) | |
| S3method(prcomp, default) | |
| S3method(prcomp, formula) | |
| S3method(predict, ar) | |
| S3method(predict, Arima) | |
| S3method(predict, arima0) | |
| S3method(predict, glm) | |
| S3method(predict, HoltWinters) | |
| S3method(predict, lm) | |
| S3method(predict, loess) | |
| S3method(predict, mlm) | |
| S3method(predict, poly) | |
| S3method(predict, ppr) | |
| S3method(predict, nls) | |
| S3method(predict, prcomp) | |
| S3method(predict, princomp) | |
| S3method(predict, smooth.spline) | |
| S3method(predict, smooth.spline.fit) | |
| S3method(predict, StructTS) | |
| S3method(princomp, default) | |
| S3method(princomp, formula) | |
| S3method(print, acf) | |
| S3method(print, anova) | |
| S3method(print, aov) | |
| S3method(print, aovlist) | |
| S3method(print, ar) | |
| S3method(print, Arima) | |
| S3method(print, arima0) | |
| S3method(print, dendrogram) | |
| S3method(print, density) | |
| S3method(print, dist) | |
| S3method(print, dummy_coef) | |
| S3method(print, dummy_coef_list) | |
| S3method(print, ecdf) | |
| S3method(print, factanal) | |
| S3method(print, family) | |
| S3method(print, formula) | |
| S3method(print, ftable) | |
| S3method(print, glm) | |
| S3method(print, hclust) | |
| S3method(print, HoltWinters) | |
| S3method(print, htest) | |
| S3method(print, infl) | |
| S3method(print, integrate) | |
| S3method(print, isoreg) | |
| S3method(print, kmeans) | |
| S3method(print, lm) | |
| S3method(print, loadings) | |
| S3method(print, loess) | |
| S3method(print, logLik) | |
| S3method(print, medpolish) | |
| S3method(print, mtable) | |
| S3method(print, nls) | |
| S3method(print, pairwise.htest) | |
| S3method(print, power.htest) | |
| S3method(print, ppr) | |
| S3method(print, prcomp) | |
| S3method(print, princomp) | |
| S3method(print, smooth.spline) | |
| S3method(print, stepfun) | |
| S3method(print, stl) | |
| S3method(print, StructTS) | |
| S3method(print, summary.aov) | |
| S3method(print, summary.aovlist) | |
| S3method(print, summary.ecdf) | |
| S3method(print, summary.glm) | |
| S3method(print, summary.lm) | |
| S3method(print, summary.loess) | |
| S3method(print, summary.manova) | |
| S3method(print, summary.nls) | |
| S3method(print, summary.ppr) | |
| S3method(print, summary.prcomp) | |
| S3method(print, summary.princomp) | |
| S3method(print, tables_aov) | |
| S3method(print, TukeyHSD) | |
| S3method(print, terms) | |
| S3method(print, ts) | |
| S3method(print, tskernel) | |
| S3method(print, tukeyline) | |
| S3method(print, tukeysmooth) | |
| S3method(print, xtabs) | |
| S3method(profile, nls) | |
| S3method(profiler, nls) | |
| S3method(proj, aov) | |
| S3method(proj, aovlist) | |
| S3method(proj, default) | |
| S3method(proj, lm) | |
| S3method(quade.test, default) | |
| S3method(quade.test, formula) | |
| S3method(qqnorm, default) | |
| S3method(qr, lm) | |
| S3method(quantile, default) | |
| S3method(quantile, ecdf) | |
| S3method(quantile, POSIXt) | |
| S3method(relevel, default) | |
| S3method(relevel, factor) | |
| S3method(relevel, ordered) | |
| S3method(reorder, default) | |
| S3method(reorder, dendrogram) | |
| S3method(residuals, default) | |
| S3method(residuals, glm) | |
| S3method(residuals, isoreg) | |
| S3method(residuals, HoltWinters) | |
| S3method(residuals, lm) | |
| S3method(residuals, nls) | |
| S3method(residuals, smooth.spline) | |
| S3method(residuals, tukeyline) | |
| S3method(rev, dendrogram) | |
| S3method(rstandard, glm) | |
| S3method(rstandard, lm) | |
| S3method(rstudent, glm) | |
| S3method(rstudent, lm) | |
| S3method(screeplot, default) | |
| S3method(se.contrast, aov) | |
| S3method(se.contrast, aovlist) | |
| S3method(selfStart, default) | |
| S3method(selfStart, formula) | |
| S3method(sigma, default) | |
| S3method(sigma, mlm) | |
| S3method(simulate, lm) | |
| S3method(sortedXyData, default) | |
| S3method(str, dendrogram) | |
| S3method(summary, aov) | |
| S3method(summary, aovlist) | |
| S3method(summary, ecdf) | |
| S3method(summary, glm) | |
| S3method(summary, infl) | |
| S3method(summary, lm) | |
| S3method(summary, loess) | |
| S3method(summary, manova) | |
| S3method(summary, mlm) | |
| S3method(summary, nls) | |
| S3method(summary, ppr) | |
| S3method(summary, prcomp) | |
| S3method(summary, princomp) | |
| S3method(summary, stepfun) | |
| S3method(summary, stl) | |
| S3method(summary, tukeysmooth) | |
| S3method(SSD, mlm) | |
| S3method(start, default) | |
| S3method(str, logLik) | |
| S3method(t, ts) | |
| S3method(t.test, default) | |
| S3method(t.test, formula) | |
| S3method(terms, default) | |
| S3method(terms, formula) | |
| S3method(terms, terms) | |
| S3method(time, default) | |
| S3method(time, ts) | |
| S3method(tsdiag, Arima) | |
| S3method(tsdiag, arima0) | |
| S3method(tsdiag, StructTS) | |
| S3method(tsSmooth, StructTS) | |
| S3method(TukeyHSD, aov) | |
| S3method(update, default) | |
| S3method(update, formula) | |
| S3method(var.test, default) | |
| S3method(var.test, formula) | |
| S3method(variable.names, default) | |
| S3method(variable.names, lm) | |
| S3method(vcov, Arima) | |
| S3method(vcov, aov) | |
| S3method(vcov, glm) | |
| S3method(vcov, lm) | |
| S3method(vcov, summary.lm) | |
| S3method(vcov, summary.glm) | |
| S3method(vcov, mlm) | |
| S3method(vcov, nls) | |
| S3method(weighted.mean, Date) | |
| S3method(weighted.mean, default) | |
| S3method(weighted.mean, difftime) | |
| S3method(weighted.mean, POSIXct) | |
| S3method(weighted.mean, POSIXlt) | |
| S3method(weights, default) | |
| S3method(weights, glm) | |
| S3method(weights, nls) | |
| S3method(wilcox.test, default) | |
| S3method(wilcox.test, formula) | |
| S3method(window, default) | |
| S3method(window, ts) | |
| S3method("window<-", ts) | |
| ## Cannot register in utils ... | |
| S3method("update", "packageStatus") |