| // This file is part of Eigen, a lightweight C++ template library | |
| // for linear algebra. | |
| // | |
| // Copyright (C) 2022 Julian Kent <jkflying@gmail.com> | |
| // | |
| // This Source Code Form is subject to the terms of the Mozilla | |
| // Public License v. 2.0. If a copy of the MPL was not distributed | |
| // with this file, You can obtain one at http://mozilla.org/MPL/2.0/. | |
| #ifndef EIGEN_SPARSEINVERSE_H | |
| #define EIGEN_SPARSEINVERSE_H | |
| // IWYU pragma: private | |
| #include "./InternalHeaderCheck.h" | |
| #include "../../../../Eigen/Sparse" | |
| #include "../../../../Eigen/SparseLU" | |
| namespace Eigen { | |
| /** | |
| * @brief Kahan algorithm based accumulator | |
| * | |
| * The Kahan sum algorithm guarantees to bound the error from floating point | |
| * accumulation to a fixed value, regardless of the number of accumulations | |
| * performed. Naive accumulation accumulates errors O(N), and pairwise O(logN). | |
| * However pairwise also requires O(logN) memory while Kahan summation requires | |
| * O(1) memory, but 4x the operations / latency. | |
| * | |
| * NB! Do not enable associative math optimizations, they may cause the Kahan | |
| * summation to be optimized out leaving you with naive summation again. | |
| * | |
| */ | |
| template <typename Scalar> | |
| class KahanSum { | |
| // Straightforward Kahan summation for accurate accumulation of a sum of numbers | |
| Scalar _sum{}; | |
| Scalar _correction{}; | |
| public: | |
| Scalar value() const { return _sum; } | |
| void operator+=(Scalar increment) { | |
| const Scalar correctedIncrement = increment + _correction; | |
| const Scalar previousSum = _sum; | |
| _sum += correctedIncrement; | |
| _correction = correctedIncrement - (_sum - previousSum); | |
| } | |
| }; | |
| template <typename Scalar, Index Width = 16> | |
| class FABSum { | |
| // https://epubs.siam.org/doi/pdf/10.1137/19M1257780 | |
| // Fast and Accurate Blocked Summation | |
| // Uses naive summation for the fast sum, and Kahan summation for the accurate sum | |
| // Theoretically SIMD sum could be changed to a tree sum which would improve accuracy | |
| // over naive summation | |
| KahanSum<Scalar> _totalSum; | |
| Matrix<Scalar, Width, 1> _block; | |
| Index _blockUsed{}; | |
| public: | |
| Scalar value() const { return _block.topRows(_blockUsed).sum() + _totalSum.value(); } | |
| void operator+=(Scalar increment) { | |
| _block(_blockUsed++, 0) = increment; | |
| if (_blockUsed == Width) { | |
| _totalSum += _block.sum(); | |
| _blockUsed = 0; | |
| } | |
| } | |
| }; | |
| /** | |
| * @brief computes an accurate dot product on two sparse vectors | |
| * | |
| * Uses an accurate summation algorithm for the accumulator in order to | |
| * compute an accurate dot product for two sparse vectors. | |
| * | |
| */ | |
| template <typename Derived, typename OtherDerived> | |
| typename Derived::Scalar accurateDot(const SparseMatrixBase<Derived>& A, const SparseMatrixBase<OtherDerived>& other) { | |
| typedef typename Derived::Scalar Scalar; | |
| EIGEN_STATIC_ASSERT_VECTOR_ONLY(Derived) | |
| EIGEN_STATIC_ASSERT_VECTOR_ONLY(OtherDerived) | |
| EIGEN_STATIC_ASSERT_SAME_VECTOR_SIZE(Derived, OtherDerived) | |
| static_assert(internal::is_same<Scalar, typename OtherDerived::Scalar>::value, "mismatched types"); | |
| internal::evaluator<Derived> thisEval(A.derived()); | |
| typename Derived::ReverseInnerIterator i(thisEval, 0); | |
| internal::evaluator<OtherDerived> otherEval(other.derived()); | |
| typename OtherDerived::ReverseInnerIterator j(otherEval, 0); | |
| FABSum<Scalar> res; | |
| while (i && j) { | |
| if (i.index() == j.index()) { | |
| res += numext::conj(i.value()) * j.value(); | |
| --i; | |
| --j; | |
| } else if (i.index() > j.index()) | |
| --i; | |
| else | |
| --j; | |
| } | |
| return res.value(); | |
| } | |
| /** | |
| * @brief calculate sparse subset of inverse of sparse matrix | |
| * | |
| * This class returns a sparse subset of the inverse of the input matrix. | |
| * The nonzeros correspond to the nonzeros of the input, plus any additional | |
| * elements required due to fill-in of the internal LU factorization. This is | |
| * is minimized via a applying a fill-reducing permutation as part of the LU | |
| * factorization. | |
| * | |
| * If there are specific entries of the input matrix which you need inverse | |
| * values for, which are zero for the input, you need to insert entries into | |
| * the input sparse matrix for them to be calculated. | |
| * | |
| * Due to the sensitive nature of matrix inversion, particularly on large | |
| * matrices which are made possible via sparsity, high accuracy dot products | |
| * based on Kahan summation are used to reduce numerical error. If you still | |
| * encounter numerical errors you may with to equilibrate your matrix before | |
| * calculating the inverse, as well as making sure it is actually full rank. | |
| */ | |
| template <typename Scalar> | |
| class SparseInverse { | |
| public: | |
| typedef SparseMatrix<Scalar, ColMajor> MatrixType; | |
| typedef SparseMatrix<Scalar, RowMajor> RowMatrixType; | |
| SparseInverse() {} | |
| /** | |
| * @brief This Constructor is for if you already have a factored SparseLU and would like to use it to calculate a | |
| * sparse inverse. | |
| * | |
| * Just call this constructor with your already factored SparseLU class and you can directly call the .inverse() | |
| * method to get the result. | |
| */ | |
| SparseInverse(const SparseLU<MatrixType>& slu) { _result = computeInverse(slu); } | |
| /** | |
| * @brief Calculate the sparse inverse from a given sparse input | |
| */ | |
| SparseInverse& compute(const SparseMatrix<Scalar>& A) { | |
| SparseLU<MatrixType> slu; | |
| slu.compute(A); | |
| _result = computeInverse(slu); | |
| return *this; | |
| } | |
| /** | |
| * @brief return the already-calculated sparse inverse, or a 0x0 matrix if it could not be computed | |
| */ | |
| const MatrixType& inverse() const { return _result; } | |
| /** | |
| * @brief Internal function to calculate the sparse inverse in a functional way | |
| * @return A sparse inverse representation, or, if the decomposition didn't complete, a 0x0 matrix. | |
| */ | |
| static MatrixType computeInverse(const SparseLU<MatrixType>& slu) { | |
| if (slu.info() != Success) { | |
| return MatrixType(0, 0); | |
| } | |
| // Extract from SparseLU and decompose into L, inverse D and U terms | |
| Matrix<Scalar, Dynamic, 1> invD; | |
| RowMatrixType Upper; | |
| { | |
| RowMatrixType DU = slu.matrixU().toSparse(); | |
| invD = DU.diagonal().cwiseInverse(); | |
| Upper = (invD.asDiagonal() * DU).template triangularView<StrictlyUpper>(); | |
| } | |
| MatrixType Lower = slu.matrixL().toSparse().template triangularView<StrictlyLower>(); | |
| // Compute the inverse and reapply the permutation matrix from the LU decomposition | |
| return slu.colsPermutation().transpose() * computeInverse(Upper, invD, Lower) * slu.rowsPermutation(); | |
| } | |
| /** | |
| * @brief Internal function to calculate the inverse from strictly upper, diagonal and strictly lower components | |
| */ | |
| static MatrixType computeInverse(const RowMatrixType& Upper, const Matrix<Scalar, Dynamic, 1>& inverseDiagonal, | |
| const MatrixType& Lower) { | |
| // Calculate the 'minimal set', which is the nonzeros of (L+U).transpose() | |
| // It could be zeroed, but we will overwrite all non-zeros anyways. | |
| MatrixType colInv = Lower.transpose().template triangularView<UnitUpper>(); | |
| colInv += Upper.transpose(); | |
| // We also need rowmajor representation in order to do efficient row-wise dot products | |
| RowMatrixType rowInv = Upper.transpose().template triangularView<UnitLower>(); | |
| rowInv += Lower.transpose(); | |
| // Use the Takahashi algorithm to build the supporting elements of the inverse | |
| // upwards and to the left, from the bottom right element, 1 col/row at a time | |
| for (Index recurseLevel = Upper.cols() - 1; recurseLevel >= 0; recurseLevel--) { | |
| const auto& col = Lower.col(recurseLevel); | |
| const auto& row = Upper.row(recurseLevel); | |
| // Calculate the inverse values for the nonzeros in this column | |
| typename MatrixType::ReverseInnerIterator colIter(colInv, recurseLevel); | |
| for (; recurseLevel < colIter.index(); --colIter) { | |
| const Scalar element = -accurateDot(col, rowInv.row(colIter.index())); | |
| colIter.valueRef() = element; | |
| rowInv.coeffRef(colIter.index(), recurseLevel) = element; | |
| } | |
| // Calculate the inverse values for the nonzeros in this row | |
| typename RowMatrixType::ReverseInnerIterator rowIter(rowInv, recurseLevel); | |
| for (; recurseLevel < rowIter.index(); --rowIter) { | |
| const Scalar element = -accurateDot(row, colInv.col(rowIter.index())); | |
| rowIter.valueRef() = element; | |
| colInv.coeffRef(recurseLevel, rowIter.index()) = element; | |
| } | |
| // And finally the diagonal, which corresponds to both row and col iterator now | |
| const Scalar diag = inverseDiagonal(recurseLevel) - accurateDot(row, colInv.col(recurseLevel)); | |
| rowIter.valueRef() = diag; | |
| colIter.valueRef() = diag; | |
| } | |
| return colInv; | |
| } | |
| private: | |
| MatrixType _result; | |
| }; | |
| } // namespace Eigen | |
| #endif |